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enriched_identification_morphology

Info

Data contract for the Identification Morphology table of the dna domain of the Biocloud. Contains taxonomic identifications based on morphological examination of specimens. - name: Identification Morphology - version: 0.0.1 - status: active

Terms of Use

Purpose

Data contract for the Identification Morphology table of the dna domain of the Biocloud. Contains taxonomic identifications based on morphological examination of specimens.

Servers

Name Type Attributes
production databricks No description.
environment: production
roles: [{'role': 'Admins', 'description': 'Access to all the data and settings'}]
catalog: dna_production
host: dbc-2030845a-6c3b.cloud.databricks.com
schema_: enriched
development databricks No description.
environment: development
roles: [{'role': 'Admins', 'description': 'Access to all the data and settings'}]
catalog: dna_development
host: dbc-03ed8bbb-c0ec.cloud.databricks.com
schema_: enriched

Schema

identification_morphology

The Identification Morphology table contains taxonomic identifications based on morphological examination. These are traditional specimen identifications made by taxonomic experts examining physical characteristics.

Field Type Attributes
identification_morphology_id bigint Biocloud generated identifier for the morphological identification.
primaryKey
primaryKeyPosition: 1
required
material_entity_id bigint Foreign key to the material entity table, linking this identification to a specimen.
catalog_number string Catalog number of the specimen that was identified.
examples: ['RMNH.5143366', 'RMNH.INS.123456']
identification_method string Method used for identification.
examples: ['Morphology']
verbatim_identification string The scientific name as identified, without interpretation.
examples: ['Apis mellifera Linnaeus, 1758', 'Bombus cf. terrestris']
verbatim_identification_rank string Taxonomic rank of the verbatim identification.
examples: ['species', 'genus', 'family', 'subspecies']
verbatim_kingdom string Kingdom-level classification of the identification.
examples: ['Animalia', 'Fungi', 'Plantae']
identified_by string Name of the person who made the identification.
examples: ['Smith, John', 'Doe, Jane A.']
identified_by_id string Identifier of the person who made the identification.
date_identified string Date when the identification was made (as string).
date_identified_ts_utc timestamp UTC timestamp when the identification was made.
identification_certainty string Level of certainty of the identification.
examples: ['certain', 'uncertain', 'probable']
identification_qualifier string Qualifier indicating uncertainty or special status (e.g., cf., aff., sp.).
examples: ['cf.', 'aff.', 'sp.', '?']
identification_qualifier_entire_name string Qualifier applying to the entire name.
identification_qualifier_species_name string Qualifier applying specifically to the species name.
identification_qualifier_subspecies_name string Qualifier applying specifically to the subspecies name.
identification_remarks string Additional remarks or notes about the identification.
identification_verification_status string Verification status of the identification.
examples: ['verified', 'unverified', 'requires verification']
type_status string Nomenclatural type status if this is a type specimen.
examples: ['holotype', 'paratype', 'syntype', 'lectotype']
source_id string The ID of this record in the source system.
required
source string The name of the source system used to create this record in the table.
required
examples: ['ada', 'sampling-sheet']
inserted_ts_utc timestamp UTC timestamp when record was inserted.
updated_ts_utc timestamp UTC timestamp when record was last updated.

SLA Properties